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Sewage released from lakeside development can reshape ecological communities. Nearshore periphyton can rapidly assimilate sewage‐associated nutrients, leading to increases of filamentous algal abundance, thus altering both food abundance and quality for grazers. In Lake Baikal, a large, ultra‐oligotrophic, remote lake in Siberia, filamentous algal abundance has increased near lakeside developments, and localized sewage input is the suspected cause. These shifts are of particular interest in Lake Baikal, where endemic littoral biodiversity is high, lakeside settlements are mostly small, tourism is relatively high (~1.2 million visitors annually), and settlements are separated by large tracts of undisturbed shoreline, enabling investigation of heterogeneity and gradients of disturbance. We surveyed sites along 40 km of Baikal's southwestern shore for sewage indicators—pharmaceuticals and personal care products (PPCPs) and microplastics—as well as periphyton and macroinvertebrate abundance and indicators of food web structure (stable isotopes and fatty acids). Summed PPCP concentrations were spatially related to lakeside development. As predicted, lakeside development was associated with more filamentous algae and lower abundance of sewage‐sensitive mollusks. Periphyton and macroinvertebrate stable isotopes and essential fatty acids suggested that food web structure otherwise remained similar across sites; yet, the invariance of amphipod fatty acid composition, relative to periphyton, suggested that grazers adjust behavior or metabolism to compensate for different periphyton assemblages. Our results demonstrate that even low levels of human disturbance can result in spatial heterogeneity of nearshore ecological responses, with potential for changing trophic interactions that propagate through the food web.

Climate warming impacts ecosystems through multiple interacting pathways, including via direct thermal responses of individual taxa and the combined responses of closely interacting species. In this study, we examined how warming and infection by an oomycete parasite (Saprolegnia) affect the dominant zooplankter of Russia's Lake Baikal, the endemic copepodEpischurella baikalensis. We used a combination of laboratory experiments, long‐term monitoring data, and population modeling. Experiments showed a large difference in the thermal optima of host and parasite, with strong negative effects of warm temperatures onE. baikalensissurvival and reproduction and a negative effect ofSaprolegniainfection on survival.Saprolegniainfection had an unexpected positive effect onE. baikalensisreproductive output, which may be consistent with fecundity compensation by females exposed to the parasite. Long‐term monitoring data suggested thatSaprolegniainfections were most common during the warmest periods of the year. Population models, parameterized with experimental and literature data, correctly predicted the timing ofSaprolegniaepizootics, but overestimated the negative effect of warming onE. baikalensispopulations. Models suggest that diel vertical migration may allowE. baikalensisto escape the negative effects of increasing temperatures and parasitism and enableE. baikalensisto persist in the face of moderate warming of Lake Baikal. Our results contribute to understanding of how warming and parasitism interact to affect the pelagic ecosystems of cold lakes and oceans and how the consequences of these interacting stressors can vary seasonally, spatially, and interannually.